Tendo: ページの作成:「 {| class='wikitable' |Species ||Brown bear |- |Library Kit ||TruSeq Nano DNA (350) |- |Population ||Hokkaido |- |Instrument model ||Illumina Hiseq X |- |Reference ||Endo et al. (2021) |- |BioProject ||PRJDB11280 |} Endo, Y., Osada, N., Mano, T., & Masuda, R. (2021). Demographic history of the brown bear (Ursus arctos) on Hokkaido Island, Japan, based on whole-genomic sequence analysis. Genome biology and evolution, 13(9), evab195. https://doi.org/10.1093/gbe/evab…」

2022-02-10T10:03:54Z

ページの作成:「 {| class='wikitable' |Species ||Brown bear |- |Library Kit ||TruSeq Nano DNA (350) |- |Population ||Hokkaido |- |Instrument model ||Illumina Hiseq X |- |Reference ||Endo et al. (2021) |- |BioProject ||PRJDB11280 |} Endo, Y., Osada, N., Mano, T., & Masuda, R. (2021). Demographic history of the brown bear (Ursus arctos) on Hokkaido Island, Japan, based on whole-genomic sequence analysis. Genome biology and evolution, 13(9), evab195. https://doi.org/10.1093/gbe/evab…」

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{| class='wikitable'
|Species ||Brown bear
|-
|Library Kit ||TruSeq Nano DNA (350)
|-
|Population ||Hokkaido
|-
|Instrument model ||Illumina Hiseq X
|-
|Reference ||Endo et al. (2021)
|-
|BioProject ||PRJDB11280
|}

Endo, Y., Osada, N., Mano, T., & Masuda, R. (2021). Demographic history of the brown bear (Ursus arctos) on Hokkaido Island, Japan, based on whole-genomic sequence analysis. Genome biology and evolution, 13(9), evab195. https://doi.org/10.1093/gbe/evab195

<pre>
BioSample Experiment NCBI accession Sex Sample name Sampling location
SAMD00282811 DRX266358 DRR276774 F Southern Hokkaido 1 (518) Kikonai, Hokkaido, Japan
SAMD00282812 DRX266359 DRR276775 M Southern Hokkaido 2 (5046) Kyowa, Hokkaido, Japan
SAMD00282813 DRX266360 DRR276776 F Central Hokkaido 1 (2231) Bibai, Hokkaido, Japan
SAMD00282814 DRX266361 DRR276777 M Central Hokkaido 2 (421) Toyotomi, Hokkaido, Japan
SAMD00282815 DRX266362 DRR276778 F Eastern Hokkaido 1 (5010) Kiyosato, Hokkaido, Japan
SAMD00282816 DRX266363 DRR276779 M Eastern Hokkaido 2 (819) Syari, Hokkaido, Japan

BioSample Experiment NCBI accession Total read base (bp) *1 *2 *3 *4
SAMD00282811 DRX266358 DRR276774 106,988,333,208 688,637,360 96.6% 4,271,702 38.79
SAMD00282812 DRX266359 DRR276775 135,445,990,414 895,857,288 98.3% 4,216,493 54.87
SAMD00282813 DRX266360 DRR276776 136,077,297,518 900,845,720 98.3% 4,329,119 53.74
SAMD00282814 DRX266361 DRR276777 127,946,260,126 842,793,684 97.6% 4,285,305 50.02
SAMD00282815 DRX266362 DRR276778 132,950,988,120 879,591,070 98.1% 4,218,591 52.47
SAMD00282816 DRX266363 DRR276779 130,135,490,440 861,014,212 97.9% 4,305,849 52.15

*1 Reads aligned to the polar bear genome
*2 Proportion of the genome covered (%)
*3 Number of SNPs
*4 Mean depth per individual

</pre>

[[Category:Brown bear]]

Brown Bear - 版の履歴